Remove direct included system headers which are included portably at ./configure time.

ok op@

Move pack progres object accounting to a single place. This makes it easier to account for the case were only loose objects are packed. A wrong amount of objects was reported before when packing loose ones.

This fixes a common issue when for e.g. generating patches with $ diff -u foo.orig foo where 'got patch' failed because 'foo.orig' has an 'unexpected status'. prodded by naddy, ok stsp

check_file_status used got_worktree_status to check if the file was in an allowed state, but it's wrong since the callback is not invoked on unchanged files. While here also fix a relate bug: unlink(newpath) is in the wrong spot and ends up removing files even when it shouldn't, so move it early in the got_worktree_schedule_* error handling. Finally, update the appropriate test case. It was passing before because got_worktree_schedule_add returned GOT_ERR_FILE_STATUS, not because check_file_status failed. ok stsp@

ok stsp

ok thomas_adam millert

Augment got_patch_progress_cb by providing the hunks that were applied with offset (or that failed) and the recoverable error encountered during the operation (bad status, missing file, ...) got_patch now proceeds when a file fails to be patched and exits with GOT_ERR_PATCH_FAILED if no other errors are encountered. While here, also add a test for the 'hunk applied with offset' case and shrink test_patch_dont_apply and illegal_status by taking advantage that 'got patch' doesn't stop at the first error. (And add some other cases to illegal_status too.) discussed with and ok stsp@